Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs1662918 chr18:34860921 G/T 6.08E-5 289 27.82 22.37 20.92 KM Plot
KIRP rs16866474 chr2:225895627 C/T 1.24E-11 289 26.1 21.1 8.6 KM Plot
KIRP rs16891464 chr6:26235300 A/G 6.21E-5 289 26 25.62 19.83 KM Plot
KIRP rs16891474 chr6:26239453 T/G 1.38E-6 282 25.97 26.2 19.27 KM Plot
KIRP rs16891484 chr6:26242930 G/A 2.88E-6 285 25.7 26.63 17.13 KM Plot
KIRP rs16893162 chr4:16185525 G/A 1.11E-5 280 25.23 30.38 14.27 KM Plot
KIRP rs16901858 chr5:35374574 A/C 4.07E-10 289 26.2 21.93 9 KM Plot
KIRP rs16930384 chr10:74931982 G/C 9.99E-15 288 26.37 22.8 5.6 KM Plot
KIRP rs16930505 chr10:75052076 T/C 8.77E-15 289 26.37 22.8 5.6 KM Plot
KIRP rs16943303 chr17:10223022 A/G 1.42E-5 286 26.28 25.75 15.53 KM Plot
KIRP rs16949707 chr16:51392210 C/T 6.32E-5 286 26.28 20.13 10.73 KM Plot
KIRP rs16961984 chr15:49317266 A/G 2.39E-5 289 25.58 26.67 12.63 KM Plot
KIRP rs17001915 chr22:40842466 G/T 8.58E-5 287 26.4 22.37 12.1 KM Plot
KIRP rs17015526 chr2:128491076 T/C 1.12E-6 289 26 23.43 8.47 KM Plot
KIRP rs17033295 chr2:45496101 G/A 1.21E-11 289 25.57 29.77 8.6 KM Plot